SNP Detail For rs16961543
1.Mapping Information
Human SNP ID rs16961543
Human chromosome chr16
Human SNP position 59906284
Pig chromosome chr6
Pig SNP position 19545390
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region16q21
Chromosome idchr16
Chromosome position59906284
Reported geneLOC644649
Mapped geneLOC101927580
Upstream gene id
Downstream gene id
SNP gene ids101927580
Upstream gene distance
Downstream gene distance
SNP risk allelers16961543-C
SNPsrs16961543
Merged0
SNP id current16961543
Contextintron_variant
Intergenic0
Allele frequency0.237
P value0.000006
Pvalue mlog5.22184874961635
P value text(Urinary free dopamine: creatinine)
Or beta0.03
%95 Ci[NR] unit increase
PlatformIllumina [899892]
CNVN
Mapped traiturinary metabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005116
Study accessionGCST001762