SNP Detail For rs16958445
1.Mapping Information
Human SNP ID rs16958445
Human chromosome chr15
Human SNP position 73884216
Pig chromosome chr7
Pig SNP position 64162272
2.Annotation Information
PubMed ID24938310
JournalSci Rep
Linkwww.ncbi.nlm.nih.gov/pubmed/24938310
StudyNovel common variants and susceptible haplotype for exfoliation glaucoma specific to Asian population.
Disease/TraitExfoliation glaucoma or exfoliation syndrome
Initial sample201 Japanese ancestry cases, 697 Japanese ancestry controls
Replication sample121 Japanese ancestry cases, 263 Japanese ancestry controls
Region15q24.1
Chromosome idchr15
Chromosome position73884216
Reported geneTBC1D21
Mapped geneTBC1D21
Upstream gene id
Downstream gene id
SNP gene ids161514
Upstream gene distance
Downstream gene distance
SNP risk allelers16958445-G
SNPsrs16958445
Merged0
SNP id current16958445
Contextmissense_variant
Intergenic0
Allele frequency0.834
P value0.0000000000000002
Pvalue mlog15.698970004336
P value text
Or beta5.18
%95 Ci[3.37-7.94]
PlatformAffymetrix [652792]
CNVN
Mapped traitexfoliation syndrome
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004235
Study accessionGCST002486