Human SNP ID | rs16953622 |
---|---|
Human chromosome | chr13 |
Human SNP position | 96856485 |
Pig chromosome | chr11 |
Pig SNP position | 73214149 |
PubMed ID | 24684796 |
---|---|
Journal | Neurobiol Aging |
Link | www.ncbi.nlm.nih.gov/pubmed/24684796 |
Study | Heritability and genetic association analysis of cognition in the Diabetes Heart Study. |
Disease/Trait | Cognitive function |
Initial sample | 423 type 2 diabetes cases and 127 unaffected siblings from 257 families |
Replication sample | NA |
Region | 13q32.1 |
Chromosome id | chr13 |
Chromosome position | 96856485 |
Reported gene | HS6ST3 |
Mapped gene | HS6ST3 - HSP90AB6P |
Upstream gene id | 266722 |
Downstream gene id | 541611 |
SNP gene ids | |
Upstream gene distance | 16923 |
Downstream gene distance | 26934 |
SNP risk allele | rs16953622-T |
SNPs | rs16953622 |
Merged | 0 |
SNP id current | 16953622 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.015 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | (3MSE) |
Or beta | 6.9917 |
%95 Ci | [3.97-10.01] unit decrease |
Platform | Affymetrix [> 371951] (imputed) |
CNV | N |
Mapped trait | cognition |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003925 |
Study accession | GCST002386 |