SNP Detail For rs16942421
1.Mapping Information
Human SNP ID rs16942421
Human chromosome chr18
Human SNP position 26576461
Pig chromosome chr6
Pig SNP position 104130748
2.Annotation Information
PubMed ID21658281
JournalBMC Cardiovasc Disord
Linkwww.ncbi.nlm.nih.gov/pubmed/21658281
StudyGWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease.
Disease/TraitSudden cardiac arrest
Initial sample88 European ancestry cases, 517 European ancestry controls
Replication sampleNA
Region18q11.2
Chromosome idchr18
Chromosome position26576461
Reported geneKCTD1
Mapped geneKCTD1
Upstream gene id
Downstream gene id
SNP gene ids284252
Upstream gene distance
Downstream gene distance
SNP risk allelers16942421-?
SNPsrs16942421
Merged0
SNP id current16942421
Contextintron_variant
Intergenic0
Allele frequency0.08
P value0.0000000008
Pvalue mlog9.09691001300805
P value text(Recessive)
Or beta1.68
%95 Ci[1.43-1.98]
PlatformAffymetrix [319222]
CNVN
Mapped traitsudden cardiac arrest
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004278
Study accessionGCST001099