SNP Detail For rs16939881
1.Mapping Information
Human SNP ID rs16939881
Human chromosome chr15
Human SNP position 58179780
Pig chromosome chr1
Pig SNP position 125914339
2.Annotation Information
PubMed ID22916037
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22916037
StudyNovel Loci for metabolic networks and multi-tissue expression studies reveal genes for atherosclerosis.
Disease/TraitMetabolite levels
Initial sample6,608 European ancestry individuals
Replication sampleNA
Region15q21.3
Chromosome idchr15
Chromosome position58179780
Reported geneAQP9
Mapped geneAQP9
Upstream gene id
Downstream gene id
SNP gene ids366
Upstream gene distance
Downstream gene distance
SNP risk allelers16939881-?
SNPsrs16939881
Merged0
SNP id current16939881
Contextintron_variant
Intergenic0
Allele frequency0.05
P value3E-27
Pvalue mlog26.5228787452803
P value text
Or beta
%95 Ci
PlatformIllumina [~ 2000000] (imputed)
CNVN
Mapped traitcoronary artery calcification
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004723
Study accessionGCST001639