SNP Detail For rs16937883
1.Mapping Information
Human SNP ID rs16937883
Human chromosome chr9
Human SNP position 20098713
Pig chromosome chr1
Pig SNP position 226395623
2.Annotation Information
PubMed ID19187332
JournalClin Exp Allergy
Linkwww.ncbi.nlm.nih.gov/pubmed/19187332
StudyAlpha-T-catenin (CTNNA3) gene was identified as a risk variant for toluene diisocyanate-induced asthma by genome-wide association analysis.
Disease/TraitAsthma (toluene diisocyanate-induced)
Initial sample84 Korean ancestry cases, 263 Korean ancestry controls
Replication sampleNA
Region9p21.3
Chromosome idchr9
Chromosome position20098713
Reported geneintergenic
Mapped geneSLC24A2 - MLLT3
Upstream gene id25769
Downstream gene id4300
SNP gene ids
Upstream gene distance309018
Downstream gene distance242952
SNP risk allelers16937883-G
SNPsrs16937883
Merged0
SNP id current16937883
Contextintergenic_variant
Intergenic1
Allele frequency0.02
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta5.29
%95 Ci[2.41-11.61]
PlatformAffymetrix [312978]
CNVN
Mapped traitasthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST000330