Human SNP ID | rs16937883 |
---|---|
Human chromosome | chr9 |
Human SNP position | 20098713 |
Pig chromosome | chr1 |
Pig SNP position | 226395623 |
PubMed ID | 19187332 |
---|---|
Journal | Clin Exp Allergy |
Link | www.ncbi.nlm.nih.gov/pubmed/19187332 |
Study | Alpha-T-catenin (CTNNA3) gene was identified as a risk variant for toluene diisocyanate-induced asthma by genome-wide association analysis. |
Disease/Trait | Asthma (toluene diisocyanate-induced) |
Initial sample | 84 Korean ancestry cases, 263 Korean ancestry controls |
Replication sample | NA |
Region | 9p21.3 |
Chromosome id | chr9 |
Chromosome position | 20098713 |
Reported gene | intergenic |
Mapped gene | SLC24A2 - MLLT3 |
Upstream gene id | 25769 |
Downstream gene id | 4300 |
SNP gene ids | |
Upstream gene distance | 309018 |
Downstream gene distance | 242952 |
SNP risk allele | rs16937883-G |
SNPs | rs16937883 |
Merged | 0 |
SNP id current | 16937883 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.02 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | 5.29 |
%95 Ci | [2.41-11.61] |
Platform | Affymetrix [312978] |
CNV | N |
Mapped trait | asthma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000270 |
Study accession | GCST000330 |