SNP Detail For rs16936455
1.Mapping Information
Human SNP ID rs16936455
Human chromosome chr8
Human SNP position 69812519
Pig chromosome chr4
Pig SNP position 71122800
2.Annotation Information
PubMed ID20041166
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20041166
StudyCommon genetic variation and the control of HIV-1 in humans.
Disease/TraitHIV-1 control
Initial sample2,362 European ancestry cases
Replication sampleNA
Region8q13.3
Chromosome idchr8
Chromosome position69812519
Reported geneNR
Mapped geneSLCO5A1
Upstream gene id
Downstream gene id
SNP gene ids81796
Upstream gene distance
Downstream gene distance
SNP risk allelers16936455-?
SNPsrs16936455
Merged0
SNP id current16936455
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text(progression)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitHIV-1 infection
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000180
Study accessionGCST000549