Human SNP ID | rs16929097 |
---|---|
Human chromosome | chr9 |
Human SNP position | 12521826 |
Pig chromosome | chr1 |
Pig SNP position | 233857275 |
PubMed ID | 23829686 |
---|---|
Journal | Hum Genomics |
Link | www.ncbi.nlm.nih.gov/pubmed/23829686 |
Study | Rank-based genome-wide analysis reveals the association of ryanodine receptor-2 gene variants with childhood asthma among human populations. |
Disease/Trait | Asthma (childhood onset) |
Initial sample | 429 European ancestry affected offspring trios |
Replication sample | 52 African American affected offspring trios, 46 Hispanic affected offspring trios |
Region | 9p23 |
Chromosome id | chr9 |
Chromosome position | 12521826 |
Reported gene | intergenic |
Mapped gene | LOC105375976 - TYRP1 |
Upstream gene id | 105375976 |
Downstream gene id | 7306 |
SNP gene ids | |
Upstream gene distance | 362711 |
Downstream gene distance | 171560 |
SNP risk allele | rs16929097-? |
SNPs | rs16929097 |
Merged | 0 |
SNP id current | 16929097 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000000008 |
Pvalue mlog | 8.09691001300805 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [786195] |
CNV | N |
Mapped trait | childhood onset asthma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004591 |
Study accession | GCST002088 |