SNP Detail For rs16928280
1.Mapping Information
Human SNP ID rs16928280
Human chromosome chr9
Human SNP position 8695233
Pig chromosome chr1
Pig SNP position 238537991
2.Annotation Information
PubMed ID24811271
JournalImmunogenetics
Linkwww.ncbi.nlm.nih.gov/pubmed/24811271
StudyGenome-wide SNP associations with rubella-specific cytokine responses in measles-mumps-rubella vaccine recipients.
Disease/TraitImmune response to measles-mumps-rubella vaccine
Initial sample883 European ancestry individuals
Replication sampleNA
Region9p24.1
Chromosome idchr9
Chromosome position8695233
Reported genePTPRD
Mapped genePTPRD
Upstream gene id
Downstream gene id
SNP gene ids5789
Upstream gene distance
Downstream gene distance
SNP risk allelers16928280-?
SNPsrs16928280
Merged0
SNP id current16928280
Contextintron_variant
Intergenic0
Allele frequency
P value0.0000000003
Pvalue mlog9.52287874528033
P value text(IFN gamma response)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitresponse to vaccine
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004645
Study accessionGCST002441