SNP Detail For rs16920624
1.Mapping Information
Human SNP ID rs16920624
Human chromosome chr10
Human SNP position 20521596
Pig chromosome chr10
Pig SNP position 59892932
2.Annotation Information
PubMed ID20360315
JournalAm J Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/20360315
StudyGenome-wide pharmacogenetics of antidepressant response in the GENDEP project.
Disease/TraitResponse to antidepressants
Initial sample706 European ancestry individuals
Replication sampleNA
Region10p12.31
Chromosome idchr10
Chromosome position20521596
Reported geneintergenic
Mapped genePLXDC2 - MIR4675
Upstream gene id84898
Downstream gene id100616383
SNP gene ids
Upstream gene distance231740
Downstream gene distance30374
SNP risk allelers16920624-?
SNPsrs16920624
Merged0
SNP id current16920624
Contextintergenic_variant
Intergenic1
Allele frequency0.07
P value0.0000007
Pvalue mlog6.15490195998574
P value text(whole sample)
Or beta16
%95 Ci[NR] unit decrease
PlatformIllumina [539391]
CNVN
Mapped traitresponse to antidepressant
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0036276
Study accessionGCST000643