Human SNP ID | rs16920624 |
---|---|
Human chromosome | chr10 |
Human SNP position | 20521596 |
Pig chromosome | chr10 |
Pig SNP position | 59892932 |
PubMed ID | 20360315 |
---|---|
Journal | Am J Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/20360315 |
Study | Genome-wide pharmacogenetics of antidepressant response in the GENDEP project. |
Disease/Trait | Response to antidepressants |
Initial sample | 706 European ancestry individuals |
Replication sample | NA |
Region | 10p12.31 |
Chromosome id | chr10 |
Chromosome position | 20521596 |
Reported gene | intergenic |
Mapped gene | PLXDC2 - MIR4675 |
Upstream gene id | 84898 |
Downstream gene id | 100616383 |
SNP gene ids | |
Upstream gene distance | 231740 |
Downstream gene distance | 30374 |
SNP risk allele | rs16920624-? |
SNPs | rs16920624 |
Merged | 0 |
SNP id current | 16920624 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.07 |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | (whole sample) |
Or beta | 16 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [539391] |
CNV | N |
Mapped trait | response to antidepressant |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0036276 |
Study accession | GCST000643 |