SNP Detail For rs16914280
1.Mapping Information
Human SNP ID rs16914280
Human chromosome chr11
Human SNP position 88588556
Pig chromosome chr9
Pig SNP position 24419599
2.Annotation Information
PubMed ID20041166
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20041166
StudyCommon genetic variation and the control of HIV-1 in humans.
Disease/TraitHIV-1 control
Initial sample2,362 European ancestry cases
Replication sampleNA
Region11q14.2
Chromosome idchr11
Chromosome position88588556
Reported geneintergenic
Mapped geneGRM5
Upstream gene id
Downstream gene id
SNP gene ids2915
Upstream gene distance
Downstream gene distance
SNP risk allelers16914280-?
SNPsrs16914280
Merged0
SNP id current16914280
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000003
Pvalue mlog6.52287874528033
P value text(progression)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitHIV-1 infection
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000180
Study accessionGCST000549