Human SNP ID | rs16912725 |
---|---|
Human chromosome | chr9 |
Human SNP position | 28359784 |
Pig chromosome | chr10 |
Pig SNP position | 42641539 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 9p21.1 |
Chromosome id | chr9 |
Chromosome position | 28359784 |
Reported gene | LINGO2 |
Mapped gene | LINGO2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 158038 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs16912725-A |
SNPs | rs16912725 |
Merged | 0 |
SNP id current | 16912725 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.004 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (IGF1 free ) |
Or beta | 0.04 |
%95 Ci | [NR] ng/mL increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | IGF-1 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004627 |
Study accession | GCST001762 |