SNP Detail For rs16912059
1.Mapping Information
Human SNP ID rs16912059
Human chromosome chr11
Human SNP position 24069597
Pig chromosome chr2
Pig SNP position 38591472
2.Annotation Information
PubMed ID26718567
JournalNeurology
Linkwww.ncbi.nlm.nih.gov/pubmed/26718567
StudyShared genetic susceptibility of vascular-related biomarkers with ischemic and recurrent stroke.
Disease/TraitThrombin-antithrombin complex levels in ischemic stroke
Initial sampleup to 1,725 European ancestry cases, up to 258 African ancestry cases, up to 117 cases
Replication sampleNA
Region11p14.3
Chromosome idchr11
Chromosome position24069597
Reported geneNR
Mapped geneLOC105376593 - LOC105376594
Upstream gene id105376593
Downstream gene id105376594
SNP gene ids
Upstream gene distance319679
Downstream gene distance189788
SNP risk allelers16912059-?
SNPsrs16912059
Merged
SNP id current16912059
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta
%95 Ci
PlatformIllumina [7500450] (imputed)
CNVN
Mapped traitIschemic stroke
Mapped trait URIhttp://purl.obolibrary.org/obo/HP_0002140
Study accessionGCST003233