SNP Detail For rs16910421
1.Mapping Information
Human SNP ID rs16910421
Human chromosome chr11
Human SNP position 12049118
Pig chromosome chr2
Pig SNP position 50673360
2.Annotation Information
PubMed ID22589738
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22589738
StudyGenome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
Disease/TraitVisceral fat
Initial sample5,560 European ancestry female individuals, 4,997 European ancestry male individuals
Replication sampleNA
Region11p15.3
Chromosome idchr11
Chromosome position12049118
Reported geneDKK3
Mapped geneLOC105376554
Upstream gene id
Downstream gene id
SNP gene ids105376554
Upstream gene distance
Downstream gene distance
SNP risk allelers16910421-A
SNPsrs16910421
Merged0
SNP id current16910421
Contextintron_variant
Intergenic0
Allele frequency0.03
P value0.000004
Pvalue mlog5.39794000867203
P value text(overall)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traitvisceral adipose tissue measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004765
Study accessionGCST001525