SNP Detail For rs16897515
1.Mapping Information
Human SNP ID rs16897515
Human chromosome chr6
Human SNP position 27310241
Pig chromosome chr7
Pig SNP position 22843375
2.Annotation Information
PubMed ID23894747
JournalJAMA Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23894747
StudyA comprehensive family-based replication study of schizophrenia genes.
Disease/TraitSchizophrenia
Initial sample11,185 European ancestry cases, 10,768 European ancestry controls
Replication sample1,262 African American ancestry individuals, 2,740 European ancestry individuals, 2,296 Asian ancestry individuals
Region6p22.1
Chromosome idchr6
Chromosome position27310241
Reported genePOM121L2
Mapped genePOM121L2
Upstream gene id
Downstream gene id
SNP gene ids94026
Upstream gene distance
Downstream gene distance
SNP risk allelers16897515-C
SNPsrs16897515
Merged0
SNP id current16897515
Contextmissense_variant
Intergenic0
Allele frequency0.16
P value0.0000004
Pvalue mlog6.39794000867203
P value text(EA)
Or beta1.3
%95 Ci[NR]
PlatformNR [1085772] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST001851