SNP Detail For rs16895057
1.Mapping Information
Human SNP ID rs16895057
Human chromosome chr6
Human SNP position 29553100
Pig chromosome chr7
Pig SNP position 25334834
2.Annotation Information
PubMed ID23456168
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23456168
StudyGenome-wide association study in Han Chinese identifies three novel loci for human height.
Disease/TraitHeight
Initial sample6,534 Han Chinese ancestry individuals
Replication sample1,881 Han Chinese ancestry individuals from 637 families
Region6p22.1
Chromosome idchr6
Chromosome position29553100
Reported geneOR2I1P
Mapped geneLINC01015 - UBD
Upstream gene id100507362
Downstream gene id10537
SNP gene ids
Upstream gene distance19532
Downstream gene distance2512
SNP risk allelers16895057-T
SNPsrs16895057
Merged0
SNP id current16895057
Contextupstream_gene_variant
Intergenic1
Allele frequency0.95
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta0.153
%95 Ci[0.088-0.218] unit increase
PlatformAffymetrix [1532051] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST001885