Human SNP ID | rs16893526 |
---|---|
Human chromosome | chr6 |
Human SNP position | 81805598 |
Pig chromosome | chr1 |
Pig SNP position | 95040536 |
PubMed ID | 21606135 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21606135 |
Study | A genome-wide association study identifies LIPA as a susceptibility gene for coronary artery disease. |
Disease/Trait | Coronary heart disease |
Initial sample | 2,078 European ancestry cases, 2,953 European ancestry controls |
Replication sample | 19,350 European ancestry cases, 35,408 European ancestry controls |
Region | 6q14.1 |
Chromosome id | chr6 |
Chromosome position | 81805598 |
Reported gene | intergenic |
Mapped gene | LOC105377873 - LINC01526 |
Upstream gene id | 105377873 |
Downstream gene id | 101928770 |
SNP gene ids | |
Upstream gene distance | 37183 |
Downstream gene distance | 7688 |
SNP risk allele | rs16893526-G |
SNPs | rs16893526 |
Merged | 0 |
SNP id current | 16893526 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.91 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 1.13 |
%95 Ci | [1.07-1.21] |
Platform | Affymetrix [608247] |
CNV | N |
Mapped trait | coronary heart disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001645 |
Study accession | GCST001079 |