SNP Detail For rs16879552
1.Mapping Information
Human SNP ID rs16879552
Human chromosome chr8
Human SNP position 32553698
Pig chromosome chr15
Pig SNP position 60193368
2.Annotation Information
PubMed ID19196962
JournalProc Natl Acad Sci U S A
Linkwww.ncbi.nlm.nih.gov/pubmed/19196962
StudyGenome-wide association study identifies NRG1 as a susceptibility locus for Hirschsprung__s disease.
Disease/TraitHirschsprung disease
Initial sample181 Chinese ancestry cases, 346 Chinese ancestry controls
Replication sample190 Chinese ancestry cases, 510 Chinese ancestry controls
Region8p12
Chromosome idchr8
Chromosome position32553698
Reported geneNRG1
Mapped geneNRG1
Upstream gene id
Downstream gene id
SNP gene ids3084
Upstream gene distance
Downstream gene distance
SNP risk allelers16879552-G
SNPsrs16879552
Merged0
SNP id current16879552
Contextintron_variant
Intergenic0
Allele frequency0.61
P value0.00000002
Pvalue mlog7.69897000433601
P value text
Or beta1.68
%95 Ci[1.40-2.00]
PlatformAffymetrix [293836]
CNVN
Mapped traitHirschsprung disease
Mapped trait URIhttp://www.orpha.net/ORDO/Orphanet_388
Study accessionGCST000334