SNP Detail For rs16872248
1.Mapping Information
Human SNP ID rs16872248
Human chromosome chr4
Human SNP position 22019877
Pig chromosome chr8
Pig SNP position 16753794
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region4p15.2
Chromosome idchr4
Chromosome position22019877
Reported geneUM9(5), KCNIP4-IT1
Mapped geneKCNIP4 - LOC100505912
Upstream gene id80333
Downstream gene id100505912
SNP gene ids
Upstream gene distance71076
Downstream gene distance307477
SNP risk allelers16872248-A
SNPsrs16872248
Merged0
SNP id current16872248
Contextintron_variant
Intergenic1
Allele frequency0.047
P value0.000006
Pvalue mlog5.22184874961635
P value text(Fat mass )
Or beta0.03
%95 Ci[NR] % increase
PlatformIllumina [899892]
CNVN
Mapped traitbody composition measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005106
Study accessionGCST001762