Human SNP ID | rs16872248 |
---|---|
Human chromosome | chr4 |
Human SNP position | 22019877 |
Pig chromosome | chr8 |
Pig SNP position | 16753794 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 4p15.2 |
Chromosome id | chr4 |
Chromosome position | 22019877 |
Reported gene | UM9(5), KCNIP4-IT1 |
Mapped gene | KCNIP4 - LOC100505912 |
Upstream gene id | 80333 |
Downstream gene id | 100505912 |
SNP gene ids | |
Upstream gene distance | 71076 |
Downstream gene distance | 307477 |
SNP risk allele | rs16872248-A |
SNPs | rs16872248 |
Merged | 0 |
SNP id current | 16872248 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.047 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (Fat mass ) |
Or beta | 0.03 |
%95 Ci | [NR] % increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | body composition measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005106 |
Study accession | GCST001762 |