SNP Detail For rs16864714
1.Mapping Information
Human SNP ID rs16864714
Human chromosome chr3
Human SNP position 152926122
Pig chromosome chr13
Pig SNP position 101109256
2.Annotation Information
PubMed ID24939585
JournalEur J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24939585
StudyGenome-wide association analysis demonstrates the highly polygenic character of age-related hearing impairment.
Disease/TraitAge-related hearing impairment (interaction)
Initial sample1,489 European ancestry individuals
Replication sampleNA
Region3q25.2 x 5q35.1
Chromosome idchr3 x 5
Chromosome position152926122 x 169749133
Reported geneNR x NR
Mapped geneP2RY1 - HMGN2P13 x DOCK2
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers16864714-? x rs197167-?
SNPsrs16864714 x rs197167
Merged
SNP id current
Contextintergenic_variant x intron_variant
Intergenic
Allele frequencyNR
P value0.000000002
Pvalue mlog8.69897000433601
P value text
Or beta
%95 Ci
PlatformIllumina [629437] (imputed)
CNVN
Mapped traitage-related hearing impairment
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005782
Study accessionGCST002487