Human SNP ID | rs16859140 |
---|---|
Human chromosome | chr3 |
Human SNP position | 112073747 |
Pig chromosome | chr13 |
Pig SNP position | 157359881 |
PubMed ID | 24478790 |
---|---|
Journal | Front Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24478790 |
Study | Genome wide association and linkage analyses identified three loci-4q25, 17q23.2, and 10q11.21-associated with variation in leukocyte telomere length: the Long Life Family Study. |
Disease/Trait | Telomere length |
Initial sample | 4,829 European ancestry individuals from 586 families with exceptional longevity |
Replication sample | NA |
Region | 3q13.2 |
Chromosome id | chr3 |
Chromosome position | 112073747 |
Reported gene | TMPRSS7 |
Mapped gene | TMPRSS7 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 344805 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs16859140-C |
SNPs | rs16859140 |
Merged | 0 |
SNP id current | 16859140 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.282 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | |
%95 Ci | [NR] |
Platform | Illumina [9250000] (imputed) |
CNV | N |
Mapped trait | telomere length |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004505 |
Study accession | GCST002336 |