SNP Detail For rs16856247
1.Mapping Information
Human SNP ID rs16856247
Human chromosome chr2
Human SNP position 168927903
Pig chromosome chr15
Pig SNP position 84511834
2.Annotation Information
PubMed ID21909109
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21909109
StudyLarge-scale genome-wide association studies in East Asians identify new genetic loci influencing metabolic traits.
Disease/TraitMetabolite levels
Initial sample12,545 Korean ancestry individuals
Replication sampleUp to 30,395 East Asian ancestry individuals
Region2q31.1
Chromosome idchr2
Chromosome position168927903
Reported geneABCB11
Mapped geneABCB11
Upstream gene id
Downstream gene id
SNP gene ids8647
Upstream gene distance
Downstream gene distance
SNP risk allelers16856247-T
SNPsrs16856247
Merged0
SNP id current16856247
Contextintron_variant
Intergenic0
Allele frequency0.35
P value0.000000000000002
Pvalue mlog14.698970004336
P value text(FPG)
Or beta0.0556
%95 Ci[0.042-0.069] mg/dL increase
PlatformAffymetrix [~ 2200000] (imputed)
CNVN
Mapped traitfasting blood glucose measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004465
Study accessionGCST001233