Human SNP ID | rs16856247 |
---|---|
Human chromosome | chr2 |
Human SNP position | 168927903 |
Pig chromosome | chr15 |
Pig SNP position | 84511834 |
PubMed ID | 21909109 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21909109 |
Study | Large-scale genome-wide association studies in East Asians identify new genetic loci influencing metabolic traits. |
Disease/Trait | Metabolite levels |
Initial sample | 12,545 Korean ancestry individuals |
Replication sample | Up to 30,395 East Asian ancestry individuals |
Region | 2q31.1 |
Chromosome id | chr2 |
Chromosome position | 168927903 |
Reported gene | ABCB11 |
Mapped gene | ABCB11 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 8647 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs16856247-T |
SNPs | rs16856247 |
Merged | 0 |
SNP id current | 16856247 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.35 |
P value | 0.000000000000002 |
Pvalue mlog | 14.698970004336 |
P value text | (FPG) |
Or beta | 0.0556 |
%95 Ci | [0.042-0.069] mg/dL increase |
Platform | Affymetrix [~ 2200000] (imputed) |
CNV | N |
Mapped trait | fasting blood glucose measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004465 |
Study accession | GCST001233 |