Human SNP ID | rs16856186 |
---|---|
Human chromosome | chr1 |
Human SNP position | 205708998 |
Pig chromosome | chr9 |
Pig SNP position | 72659078 |
PubMed ID | 22424883 |
---|---|
Journal | J Allergy Clin Immunol |
Link | www.ncbi.nlm.nih.gov/pubmed/22424883 |
Study | Genome-wide association study of lung function decline in adults with and without asthma. |
Disease/Trait | Pulmonary function decline |
Initial sample | 1,441 European ancestry asthma cases, 2,677 European ancestry controls |
Replication sample | 1,160 European ancestry asthma cases, 10,858 European ancestry controls |
Region | 1q32.1 |
Chromosome id | chr1 |
Chromosome position | 205708998 |
Reported gene | intergenic |
Mapped gene | LOC105371701 - NUCKS1 |
Upstream gene id | 105371701 |
Downstream gene id | 64710 |
SNP gene ids | |
Upstream gene distance | 18354 |
Downstream gene distance | 3821 |
SNP risk allele | rs16856186-? |
SNPs | rs16856186 |
Merged | 0 |
SNP id current | 16856186 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (FEV1 decline in asthmatics) |
Or beta | 0.2684 |
%95 Ci | [0.15-0.39] unit increase |
Platform | Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | forced expiratory volume |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004314 |
Study accession | GCST001444 |