SNP Detail For rs16853722
1.Mapping Information
Human SNP ID rs16853722
Human chromosome chr3
Human SNP position 169432844
Pig chromosome chr13
Pig SNP position 116803262
2.Annotation Information
PubMed ID22797727
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22797727
StudyMeta-analysis identifies multiple loci associated with kidney function-related traits in east Asian populations.
Disease/TraitRenal function-related traits (BUN)
Initial sample39,717 East Asian ancestry individuals
Replication sample17,461 East Asian ancestry individuals
Region3q26.2
Chromosome idchr3
Chromosome position169432844
Reported geneMECOM
Mapped geneMECOM
Upstream gene id
Downstream gene id
SNP gene ids2122
Upstream gene distance
Downstream gene distance
SNP risk allelers16853722-C
SNPsrs16853722
Merged0
SNP id current16853722
Contextintron_variant
Intergenic0
Allele frequency0.29
P value0.00000000000003
Pvalue mlog13.5228787452803
P value text
Or beta0.0064
%95 Ci[0.0048-0.0080] mg/dl increase
PlatformAffymetrix, Illumina [2281523] (imputed)
CNVN
Mapped traitrenal system measurement, blood urea nitrogen measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004742, http://www.ebi.ac.uk/efo/EFO_0004741
Study accessionGCST001610