SNP Detail For rs16850360
1.Mapping Information
Human SNP ID rs16850360
Human chromosome chr4
Human SNP position 74006728
Pig chromosome chr8
Pig SNP position 74152555
2.Annotation Information
PubMed ID22916037
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22916037
StudyNovel Loci for metabolic networks and multi-tissue expression studies reveal genes for atherosclerosis.
Disease/TraitMetabolite levels
Initial sample6,608 European ancestry individuals
Replication sampleNA
Region4q13.3
Chromosome idchr4
Chromosome position74006728
Reported geneCXCL5, PF4, PPBP
Mapped geneLOC105377274
Upstream gene id
Downstream gene id
SNP gene ids105377274
Upstream gene distance
Downstream gene distance
SNP risk allelers16850360-?
SNPsrs16850360
Merged0
SNP id current16850360
Contextupstream_gene_variant
Intergenic0
Allele frequency0.03
P value0.0000000003
Pvalue mlog9.52287874528033
P value text
Or beta
%95 Ci
PlatformIllumina [~ 2000000] (imputed)
CNVN
Mapped traitcoronary artery calcification
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004723
Study accessionGCST001639