SNP Detail For rs16840900
1.Mapping Information
Human SNP ID rs16840900
Human chromosome chr4
Human SNP position 7715902
Pig chromosome chr8
Pig SNP position 4002369
2.Annotation Information
PubMed ID26297903
JournalProg Neuropsychopharmacol Biol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/26297903
StudyGenetics of long-term treatment outcome in bipolar disorder.
Disease/TraitDepressive and manic episodes in bipolar disorder
Initial sample723 European ancestry cases
Replication sampleNA
Region4p16.1
Chromosome idchr4
Chromosome position7715902
Reported geneSORCS2
Mapped geneSORCS2
Upstream gene id
Downstream gene id
SNP gene ids57537
Upstream gene distance
Downstream gene distance
SNP risk allelers16840900-?
SNPsrs16840900
Merged
SNP id current16840900
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.09
%95 Ci[NR] unit increase
PlatformAffymetrix [329806]
CNVN
Mapped traitmanic episode measurement, depressive episode measurement, bipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007705, http://www.ebi.ac.uk/efo/EFO_0007704, http://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST003090