SNP Detail For rs16836124
1.Mapping Information
Human SNP ID rs16836124
Human chromosome chr2
Human SNP position 154146334
Pig chromosome chr15
Pig SNP position 68725813
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region2q24.1
Chromosome idchr2
Chromosome position154146334
Reported geneGALNT13
Mapped geneGALNT13
Upstream gene id
Downstream gene id
SNP gene ids114805
Upstream gene distance
Downstream gene distance
SNP risk allelers16836124-G
SNPsrs16836124
Merged0
SNP id current16836124
Contextintron_variant
Intergenic0
Allele frequency0.054
P value0.000006
Pvalue mlog5.22184874961635
P value text(ALT/AST)
Or beta0.03
%95 Ci[NR] unit increase
PlatformIllumina [899892]
CNVN
Mapped traitaspartate aminotransferase measurement, serum alanine aminotransferase measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004736, http://www.ebi.ac.uk/efo/EFO_0004735
Study accessionGCST001762