SNP Detail For rs16835742
1.Mapping Information
Human SNP ID rs16835742
Human chromosome chr1
Human SNP position 33715242
Pig chromosome chr6
Pig SNP position 84072459
2.Annotation Information
PubMed ID22449649
JournalJ Am Acad Child Adolesc Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22449649
StudyGenome-wide association study of intelligence: additive effects of novel brain expressed genes.
Disease/TraitIntelligence
Initial sample656 European ancestry individuals from ADHD families
Replication sampleNA
Region1p35.1
Chromosome idchr1;1;1;1
Chromosome position33720593;33723829;33716230;33715242
Reported geneCSMD2
Mapped geneCSMD2; CSMD2; CSMD2; CSMD2
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers528059-?; rs544991-?; rs7533254-?; rs16835742-?
SNPsrs528059; rs544991; rs7533254; rs16835742
Merged0
SNP id current
Contextintron_variant; intron_variant; intron_variant; intron_variant
Intergenic
Allele frequencyNR
P value0.00000008
Pvalue mlog7.09691001300805
P value text(Brain structure)
Or beta
%95 Ci
PlatformIllumina [795637]
CNVN
Mapped traitintelligence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004337
Study accessionGCST001428