SNP Detail For rs1679013
1.Mapping Information
Human SNP ID rs1679013
Human chromosome chr9
Human SNP position 22206988
Pig chromosome chr1
Pig SNP position 223738510
2.Annotation Information
PubMed ID23770605
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23770605
StudyGenome-wide association study identifies multiple risk loci for chronic lymphocytic leukemia.
Disease/TraitChronic lymphocytic leukemia
Initial sample2,179 European ancestry cases, 6,221 European ancestry controls
Replication sample1,709 European ancestry cases, 6,318 European ancestry controls
Region9p21.3
Chromosome idchr9
Chromosome position22206988
Reported geneAS1, CDKN2B
Mapped geneCDKN2B-AS1 - DMRTA1
Upstream gene id100048912
Downstream gene id63951
SNP gene ids
Upstream gene distance85891
Downstream gene distance239853
SNP risk allelers1679013-C
SNPsrs1679013
Merged0
SNP id current1679013
Contextintron_variant
Intergenic1
Allele frequency0.52
P value0.00000001
Pvalue mlog8
P value text
Or beta1.19
%95 Ci[1.12-1.27]
PlatformIllumina [549934]
CNVN
Mapped traitchronic lymphocytic leukemia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000095
Study accessionGCST002073