Human SNP ID | rs1671152 |
---|---|
Human chromosome | chr19 |
Human SNP position | 55014977 |
Pig chromosome | chr6 |
Pig SNP position | 53815953 |
PubMed ID | 20526338 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20526338 |
Study | Genome-wide meta-analyses identifies seven loci associated with platelet aggregation in response to agonists. |
Disease/Trait | Platelet aggregation |
Initial sample | Up to 3,991 European ancestry individuals |
Replication sample | Up to 840 African American individuals |
Region | 19q13.42 |
Chromosome id | chr19 |
Chromosome position | 55014977 |
Reported gene | GP6 |
Mapped gene | GP6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 51206 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1671152-T |
SNPs | rs1671152 |
Merged | 0 |
SNP id current | 1671152 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.142 |
P value | 0.00000000000008 |
Pvalue mlog | 13.096910013008 |
P value text | (collagen) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 2330000] (imputed) |
CNV | N |
Mapped trait | platelet aggregation |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0070527 |
Study accession | GCST000693 |