SNP Detail For rs1671152
1.Mapping Information
Human SNP ID rs1671152
Human chromosome chr19
Human SNP position 55014977
Pig chromosome chr6
Pig SNP position 53815953
2.Annotation Information
PubMed ID20526338
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20526338
StudyGenome-wide meta-analyses identifies seven loci associated with platelet aggregation in response to agonists.
Disease/TraitPlatelet aggregation
Initial sampleUp to 3,991 European ancestry individuals
Replication sampleUp to 840 African American individuals
Region19q13.42
Chromosome idchr19
Chromosome position55014977
Reported geneGP6
Mapped geneGP6
Upstream gene id
Downstream gene id
SNP gene ids51206
Upstream gene distance
Downstream gene distance
SNP risk allelers1671152-T
SNPsrs1671152
Merged0
SNP id current1671152
Contextmissense_variant
Intergenic0
Allele frequency0.142
P value0.00000000000008
Pvalue mlog13.096910013008
P value text(collagen)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 2330000] (imputed)
CNVN
Mapped traitplatelet aggregation
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0070527
Study accessionGCST000693