SNP Detail For rs1656402
1.Mapping Information
Human SNP ID rs1656402
Human chromosome chr2
Human SNP position 232561816
Pig chromosome chr15
Pig SNP position 146972593
2.Annotation Information
PubMed ID21079520
JournalJ Thorac Oncol
Linkwww.ncbi.nlm.nih.gov/pubmed/21079520
StudyGenome-wide association study on overall survival of advanced non-small cell lung cancer patients treated with carboplatin and paclitaxel.
Disease/TraitNon-small cell lung cancer (survival)
Initial sample105 East Asian ancestry cases
Replication sampleNA
Region2q37.1
Chromosome idchr2
Chromosome position232561816
Reported geneEIF4E2
Mapped geneEIF4E2
Upstream gene id
Downstream gene id
SNP gene ids9470
Upstream gene distance
Downstream gene distance
SNP risk allelers1656402-?
SNPsrs1656402
Merged0
SNP id current1656402
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.00000008
Pvalue mlog7.09691001300805
P value text
Or beta2.38
%95 Ci[1.49-3.85] (AG)
PlatformIllumina [109365]
CNVN
Mapped traitnon-small cell lung carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003060
Study accessionGCST000871