Human SNP ID | rs164368 |
---|---|
Human chromosome | chr5 |
Human SNP position | 161197451 |
Pig chromosome | chr16 |
Pig SNP position | 67624320 |
PubMed ID | 26169365 |
---|---|
Journal | BMC Complement Altern Med |
Link | www.ncbi.nlm.nih.gov/pubmed/26169365 |
Study | Susceptible gene of stasis-stagnation constitution from genome-wide association study related to cardiovascular disturbance and possible regulated traditional Chinese medicine. |
Disease/Trait | Yu-Zhi constitution type in type 2 diabetes |
Initial sample | 539 non-aboriginal Taiwanese ancestry low Yu-Zhi score individuals, 408 non-aboriginal Taiwanese ancestry high Yu-Zhi score individuals |
Replication sample | NA |
Region | 5q34 |
Chromosome id | chr5 |
Chromosome position | 161197451 |
Reported gene | Intergenic |
Mapped gene | LOC105377693 - GABRB2 |
Upstream gene id | 105377693 |
Downstream gene id | 2561 |
SNP gene ids | |
Upstream gene distance | 112075 |
Downstream gene distance | 90968 |
SNP risk allele | rs164368-T |
SNPs | rs164368 |
Merged | |
SNP id current | 164368 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.785 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (Genotype model) |
Or beta | 1.12 |
%95 Ci | [0.89-1.40] |
Platform | Illumina [508761] |
CNV | N |
Mapped trait | Yu-Zhi constitution type, type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007638, http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST003026 |