SNP Detail For rs164368
1.Mapping Information
Human SNP ID rs164368
Human chromosome chr5
Human SNP position 161197451
Pig chromosome chr16
Pig SNP position 67624320
2.Annotation Information
PubMed ID26169365
JournalBMC Complement Altern Med
Linkwww.ncbi.nlm.nih.gov/pubmed/26169365
StudySusceptible gene of stasis-stagnation constitution from genome-wide association study related to cardiovascular disturbance and possible regulated traditional Chinese medicine.
Disease/TraitYu-Zhi constitution type in type 2 diabetes
Initial sample539 non-aboriginal Taiwanese ancestry low Yu-Zhi score individuals, 408 non-aboriginal Taiwanese ancestry high Yu-Zhi score individuals
Replication sampleNA
Region5q34
Chromosome idchr5
Chromosome position161197451
Reported geneIntergenic
Mapped geneLOC105377693 - GABRB2
Upstream gene id105377693
Downstream gene id2561
SNP gene ids
Upstream gene distance112075
Downstream gene distance90968
SNP risk allelers164368-T
SNPsrs164368
Merged
SNP id current164368
Contextintergenic_variant
Intergenic1
Allele frequency0.785
P value0.000006
Pvalue mlog5.22184874961635
P value text(Genotype model)
Or beta1.12
%95 Ci[0.89-1.40]
PlatformIllumina [508761]
CNVN
Mapped traitYu-Zhi constitution type, type II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007638, http://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST003026