SNP Detail For rs1635501
1.Mapping Information
Human SNP ID rs1635501
Human chromosome chr1
Human SNP position 241877473
Pig chromosome chr10
Pig SNP position 17659016
2.Annotation Information
PubMed ID22267201
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22267201
StudyMeta-analyses identify 13 loci associated with age at menopause and highlight DNA repair and immune pathways.
Disease/TraitMenopause (age at onset)
Initial sample38,968 European ancestry female individuals
Replication sampleUp to 14,435 European ancestry female individuals
Region1q43
Chromosome idchr1
Chromosome position241877473
Reported geneEXO1
Mapped geneEXO1
Upstream gene id
Downstream gene id
SNP gene ids9156
Upstream gene distance
Downstream gene distance
SNP risk allelers1635501-C
SNPsrs1635501
Merged0
SNP id current1635501
Contextintron_variant
Intergenic0
Allele frequency0.478
P value0.0000000008
Pvalue mlog9.09691001300805
P value text
Or beta0.164
%95 Ci[0.11-0.22] years decrease
PlatformAffymetrix, Illumina [2551160] (imputed)
CNVN
Mapped traitage at menopause
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004704
Study accessionGCST001381