Human SNP ID | rs163030 |
---|---|
Human chromosome | chr5 |
Human SNP position | 77485646 |
Pig chromosome | chr2 |
Pig SNP position | 87981341 |
PubMed ID | 21502949 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/21502949 |
Study | Discovery and replication of dopamine-related gene effects on caudate volume in young and elderly populations (N=1198) using genome-wide search. |
Disease/Trait | Caudate nucleus volume |
Initial sample | 734 European ancestry individuals |
Replication sample | 464 European ancestry individuals |
Region | 5q13.3 |
Chromosome id | chr5 |
Chromosome position | 77485646 |
Reported gene | PDE8B, WDR41 |
Mapped gene | WDR41 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55255 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs163030-A |
SNPs | rs163030 |
Merged | 0 |
SNP id current | 163030 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.5 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | (Right caudate) |
Or beta | 117.5 |
%95 Ci | [73.01-161.99] mm3 increase |
Platform | Illumina [520459] |
CNV | N |
Mapped trait | brain measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004464 |
Study accession | GCST001045 |