SNP Detail For rs163030
1.Mapping Information
Human SNP ID rs163030
Human chromosome chr5
Human SNP position 77485646
Pig chromosome chr2
Pig SNP position 87981341
2.Annotation Information
PubMed ID21502949
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/21502949
StudyDiscovery and replication of dopamine-related gene effects on caudate volume in young and elderly populations (N=1198) using genome-wide search.
Disease/TraitCaudate nucleus volume
Initial sample734 European ancestry individuals
Replication sample464 European ancestry individuals
Region5q13.3
Chromosome idchr5
Chromosome position77485646
Reported genePDE8B, WDR41
Mapped geneWDR41
Upstream gene id
Downstream gene id
SNP gene ids55255
Upstream gene distance
Downstream gene distance
SNP risk allelers163030-A
SNPsrs163030
Merged0
SNP id current163030
Contextintron_variant
Intergenic0
Allele frequency0.5
P value0.0000002
Pvalue mlog6.69897000433601
P value text(Right caudate)
Or beta117.5
%95 Ci[73.01-161.99] mm3 increase
PlatformIllumina [520459]
CNVN
Mapped traitbrain measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004464
Study accessionGCST001045