SNP Detail For rs1624802
1.Mapping Information
Human SNP ID rs1624802
Human chromosome chr12
Human SNP position 130012927
Pig chromosome chr14
Pig SNP position 26689869
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region12q24.33
Chromosome idchr12
Chromosome position130012927
Reported geneTMEM132D
Mapped geneLOC105370076 - LOC100190940
Upstream gene id105370076
Downstream gene id100190940
SNP gene ids
Upstream gene distance37197
Downstream gene distance20885
SNP risk allelers1624802-A
SNPsrs1624802
Merged0
SNP id current1624802
Contextintergenic_variant
Intergenic1
Allele frequency0.49
P value0.0000005
Pvalue mlog6.30102999566398
P value text(Ft4 )
Or beta0.02
%95 Ci[NR] ng/dL increase
PlatformIllumina [899892]
CNVN
Mapped traithormone measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004730
Study accessionGCST001762