Human SNP ID | rs1624802 |
---|---|
Human chromosome | chr12 |
Human SNP position | 130012927 |
Pig chromosome | chr14 |
Pig SNP position | 26689869 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 12q24.33 |
Chromosome id | chr12 |
Chromosome position | 130012927 |
Reported gene | TMEM132D |
Mapped gene | LOC105370076 - LOC100190940 |
Upstream gene id | 105370076 |
Downstream gene id | 100190940 |
SNP gene ids | |
Upstream gene distance | 37197 |
Downstream gene distance | 20885 |
SNP risk allele | rs1624802-A |
SNPs | rs1624802 |
Merged | 0 |
SNP id current | 1624802 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.49 |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | (Ft4 ) |
Or beta | 0.02 |
%95 Ci | [NR] ng/dL increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | hormone measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004730 |
Study accession | GCST001762 |