Human SNP ID | rs1620921 |
---|---|
Human chromosome | chr6 |
Human SNP position | 160776055 |
Pig chromosome | chr1 |
Pig SNP position | 8741653 |
PubMed ID | 25575512 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25575512 |
Study | Evidence for several independent genetic variants affecting lipoprotein (a) cholesterol levels. |
Disease/Trait | Lipoprotein (a) - cholesterol levels |
Initial sample | 1,376 Old Order Amish individuals |
Replication sample | NA |
Region | 6q26 |
Chromosome id | chr6 |
Chromosome position | 160776055 |
Reported gene | intergenic |
Mapped gene | PLG - LOC105378091 |
Upstream gene id | 5340 |
Downstream gene id | 105378091 |
SNP gene ids | |
Upstream gene distance | 22001 |
Downstream gene distance | 245 |
SNP risk allele | rs1620921-? |
SNPs | rs1620921 |
Merged | 0 |
SNP id current | 1620921 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.00000005 |
Pvalue mlog | 7.30102999566398 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [~ 2500000] (imputed) |
CNV | N |
Mapped trait | lipoprotein A measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006925 |
Study accession | GCST002746 |