SNP Detail For rs161802
1.Mapping Information
Human SNP ID rs161802
Human chromosome chr1
Human SNP position 7982766
Pig chromosome chr6
Pig SNP position 63019842
2.Annotation Information
PubMed ID24262325
JournalStroke
Linkwww.ncbi.nlm.nih.gov/pubmed/24262325
StudyShared genetic susceptibility to ischemic stroke and coronary artery disease: a genome-wide analysis of common variants.
Disease/TraitIschemic stroke
Initial sample12,389 cases, 62,004 controls
Replication sampleNA
Region1p36.23
Chromosome idchr1
Chromosome position7982766
Reported genePARK7
Mapped genePARK7
Upstream gene id
Downstream gene id
SNP gene ids11315
Upstream gene distance
Downstream gene distance
SNP risk allelers161802-T
SNPsrs161802
Merged0
SNP id current161802
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta1.1111
%95 Ci[1.08-1.16]
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitstroke
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000712
Study accessionGCST002286