Human SNP ID | rs161645 |
---|---|
Human chromosome | chr5 |
Human SNP position | 104734216 |
Pig chromosome | chr2 |
Pig SNP position | 114850372 |
PubMed ID | 23290196 |
---|---|
Journal | Biol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/23290196 |
Study | A genome-wide association study of depressive symptoms. |
Disease/Trait | Depression (quantitative trait) |
Initial sample | up to 34,549 European ancestry individuals |
Replication sample | up to 16,709 European ancestry individuals |
Region | 5q21.2 |
Chromosome id | chr5 |
Chromosome position | 104734216 |
Reported gene | NUDT12 |
Mapped gene | LOC105379109 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105379109 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs161645-A |
SNPs | rs161645 |
Merged | 0 |
SNP id current | 161645 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.34 |
P value | 0.00000008 |
Pvalue mlog | 7.09691001300805 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [2391896] (imputed) |
CNV | N |
Mapped trait | unipolar depression |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003761 |
Study accession | GCST001802 |