Human SNP ID | rs1600249 |
---|---|
Human chromosome | chr8 |
Human SNP position | 11502129 |
Pig chromosome | chr14 |
Pig SNP position | 15883893 |
PubMed ID | 21452313 |
---|---|
Journal | Arthritis Rheum |
Link | www.ncbi.nlm.nih.gov/pubmed/21452313 |
Study | Genome-wide association study of rheumatoid arthritis in Koreans: population-specific loci as well as overlap with European susceptibility loci. |
Disease/Trait | Rheumatoid arthritis |
Initial sample | 801 Korean ancestry cases, 757 Korean ancestry controls |
Replication sample | 718 Korean ancestry cases, 719 Korean ancestry controls |
Region | 8p23.1 |
Chromosome id | chr8 |
Chromosome position | 11502129 |
Reported gene | BLK |
Mapped gene | BLK |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 640 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1600249-? |
SNPs | rs1600249 |
Merged | 0 |
SNP id current | 1600249 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 1.3 |
%95 Ci | [1.16-1.45] |
Platform | Illumina [441398] |
CNV | N |
Mapped trait | rheumatoid arthritis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000685 |
Study accession | GCST001022 |