Human SNP ID | rs1572299 |
---|---|
Human chromosome | chr9 |
Human SNP position | 118584139 |
Pig chromosome | chr1 |
Pig SNP position | 290870934 |
PubMed ID | 19571808 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/19571808 |
Study | Common variants conferring risk of schizophrenia. |
Disease/Trait | Schizophrenia |
Initial sample | 2,663 European ancestry cases, 13,498 European ancestry controls |
Replication sample | 10,282 European ancestry cases, 21,093 European ancestry controls |
Region | 9q33.1 |
Chromosome id | chr9 |
Chromosome position | 118584139 |
Reported gene | intergenic |
Mapped gene | LOC105376248 - LOC105376249 |
Upstream gene id | 105376248 |
Downstream gene id | 105376249 |
SNP gene ids | |
Upstream gene distance | 60642 |
Downstream gene distance | 8922 |
SNP risk allele | rs1572299-A |
SNPs | rs1572299 |
Merged | 0 |
SNP id current | 1572299 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 1.08 |
%95 Ci | [NR] |
Platform | Illumina [314868] |
CNV | N |
Mapped trait | schizophrenia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692 |
Study accession | GCST000435 |