SNP Detail For rs1568889
1.Mapping Information
Human SNP ID rs1568889
Human chromosome chr11
Human SNP position 27987916
Pig chromosome chr2
Pig SNP position 34937184
2.Annotation Information
PubMed ID21254220
JournalGenet Epidemiol
Linkwww.ncbi.nlm.nih.gov/pubmed/21254220
StudyPropensity score-based nonparametric test revealing genetic variants underlying bipolar disorder.
Disease/TraitBipolar disorder
Initial sample1,868 European ancestry cases, 2,938 European ancestry controls
Replication sampleNA
Region11p14.1
Chromosome idchr11
Chromosome position27987916
Reported geneNR
Mapped geneHSP90AA2P - KIF18A
Upstream gene id3324
Downstream gene id81930
SNP gene ids
Upstream gene distance96824
Downstream gene distance32700
SNP risk allelers1568889-?
SNPsrs1568889
Merged0
SNP id current1568889
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(recessive)
Or beta
%95 Ci
PlatformAffymetrix [NR]
CNVN
Mapped traitbipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST000961