Human SNP ID | rs1568657 |
---|---|
Human chromosome | chr15 |
Human SNP position | 83057427 |
Pig chromosome | chr7 |
Pig SNP position | 57375456 |
PubMed ID | 21326860 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/21326860 |
Study | Identification of novel susceptibility Loci for kawasaki disease in a Han chinese population by a genome-wide association study. |
Disease/Trait | Kawasaki disease |
Initial sample | 250 Han Chinese ancestry cases, 446 Han Chinese ancestry controls |
Replication sample | 208 Han Chinese ancestry cases, 366 Han Chinese ancestry controls |
Region | 15q25.2 |
Chromosome id | chr15 |
Chromosome position | 83057427 |
Reported gene | BTBD1 |
Mapped gene | BTBD1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 53339 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1568657-G |
SNPs | rs1568657 |
Merged | 0 |
SNP id current | 1568657 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.52 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | 1.409 |
%95 Ci | [1.191-1.667] |
Platform | Affymetrix [723638] |
CNV | N |
Mapped trait | mucocutaneous lymph node syndrome |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004246 |
Study accession | GCST000962 |