SNP Detail For rs1567127
1.Mapping Information
Human SNP ID rs1567127
Human chromosome chr11
Human SNP position 132959967
Pig chromosome chr9
Pig SNP position 66058594
2.Annotation Information
PubMed ID22589738
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22589738
StudyGenome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
Disease/TraitVisceral adipose tissue/subcutaneous adipose tissue ratio
Initial sample5,560 European ancestry female individuals, 4,997 European ancestry male individuals
Replication sampleNA
Region11q25
Chromosome idchr11
Chromosome position132959967
Reported geneOPCML
Mapped geneOPCML, LOC105369580
Upstream gene id
Downstream gene id
SNP gene ids4978, 105369580
Upstream gene distance
Downstream gene distance
SNP risk allelers1567127-G
SNPsrs1567127
Merged0
SNP id current1567127
Contextintron_variant
Intergenic0
Allele frequency0.2
P value0.000001
Pvalue mlog6
P value text(women)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traitvisceral:subcutaneous adipose tissue ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004767
Study accessionGCST001524