SNP Detail For rs1559777
1.Mapping Information
Human SNP ID rs1559777
Human chromosome chr15
Human SNP position 57788419
Pig chromosome chr1
Pig SNP position 126316872
2.Annotation Information
PubMed ID23049088
JournalInvest Ophthalmol Vis Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/23049088
StudyA genome-wide association study provides evidence for association of chromosome 8p23 (MYP10) and 10q21.1 (MYP15) with high myopia in the French Population.
Disease/TraitMyopia (pathological)
Initial sample187 European ancestry cases, 1064 European ancestry controls
Replication sample
Region15q21.3
Chromosome idchr15
Chromosome position57788419
Reported geneintergenic
Mapped geneLOC105370834 - ALDH1A2
Upstream gene id105370834
Downstream gene id8854
SNP gene ids
Upstream gene distance13095
Downstream gene distance165005
SNP risk allelers1559777-?
SNPsrs1559777
Merged0
SNP id current1559777
Contextintergenic_variant
Intergenic1
Allele frequency0.2
P value0.000001
Pvalue mlog6
P value text
Or beta
%95 Ci[NR]
PlatformAffymetrix, Illumina [152234]
CNVN
Mapped traitpathological myopia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004207
Study accessionGCST001712