SNP Detail For rs1559473
1.Mapping Information
Human SNP ID rs1559473
Human chromosome chr2
Human SNP position 222016799
Pig chromosome chr15
Pig SNP position 137411253
2.Annotation Information
PubMed ID24529757
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/24529757
StudyGenome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations.
Disease/TraitAmyotrophic lateral sclerosis (sporadic)
Initial sample250 Han Chinese ancestry cases, 250 Han Chinese ancestry controls
Replication sampleNA
Region2q36.1
Chromosome idchr2
Chromosome position222016799
Reported genePAX3
Mapped geneHSPA9P1 - PAX3
Upstream gene id266724
Downstream gene id5077
SNP gene ids
Upstream gene distance52342
Downstream gene distance183088
SNP risk allelers1559473-?
SNPsrs1559473
Merged0
SNP id current1559473
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.000001
Pvalue mlog6
P value text
Or beta
%95 Ci
PlatformIllumina [859311]
CNVN
Mapped traitsporadic amyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001357
Study accessionGCST002337