SNP Detail For rs1555399
1.Mapping Information
Human SNP ID rs1555399
Human chromosome chr14
Human SNP position 67517653
Pig chromosome chr7
Pig SNP position 97535736
2.Annotation Information
PubMed ID25064009
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25064009
StudyLarge-scale meta-analysis of genome-wide association data identifies six new risk loci for Parkinson__s disease.
Disease/TraitParkinson__s disease
Initial sample13,708 European ancestry cases, 95,282 European ancestry controls
Replication sample5,353 European ancestry cases, 5,551 European ancestry controls
Region14q24.1
Chromosome idchr14
Chromosome position67517653
Reported geneTMEM229B
Mapped geneTMEM229B
Upstream gene id
Downstream gene id
SNP gene ids161145
Upstream gene distance
Downstream gene distance
SNP risk allelers1555399-T
SNPsrs1555399
Merged0
SNP id current1555399
Contextintron_variant
Intergenic0
Allele frequency0.532
P value0.00000000000007
Pvalue mlog13.1549019599857
P value text
Or beta1.1148
%95 Ci[1.09-1.14]
PlatformIllumina [7893274] (imputed)
CNVN
Mapped traitParkinson__s disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002508
Study accessionGCST002544