Human SNP ID | rs1555399 |
---|---|
Human chromosome | chr14 |
Human SNP position | 67517653 |
Pig chromosome | chr7 |
Pig SNP position | 97535736 |
PubMed ID | 25064009 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25064009 |
Study | Large-scale meta-analysis of genome-wide association data identifies six new risk loci for Parkinson__s disease. |
Disease/Trait | Parkinson__s disease |
Initial sample | 13,708 European ancestry cases, 95,282 European ancestry controls |
Replication sample | 5,353 European ancestry cases, 5,551 European ancestry controls |
Region | 14q24.1 |
Chromosome id | chr14 |
Chromosome position | 67517653 |
Reported gene | TMEM229B |
Mapped gene | TMEM229B |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 161145 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1555399-T |
SNPs | rs1555399 |
Merged | 0 |
SNP id current | 1555399 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.532 |
P value | 0.00000000000007 |
Pvalue mlog | 13.1549019599857 |
P value text | |
Or beta | 1.1148 |
%95 Ci | [1.09-1.14] |
Platform | Illumina [7893274] (imputed) |
CNV | N |
Mapped trait | Parkinson__s disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002508 |
Study accession | GCST002544 |