Human SNP ID | rs1550576 |
---|---|
Human chromosome | chr15 |
Human SNP position | 57921216 |
Pig chromosome | chr1 |
Pig SNP position | 126132047 |
PubMed ID | 19609347 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19609347 |
Study | A genome-wide association study of hypertension and blood pressure in African Americans. |
Disease/Trait | Hypertension |
Initial sample | 509 African American cases, 508 African American controls |
Replication sample | 366 West African ancestry cases, 614 West African ancestry controls |
Region | 15q21.3 |
Chromosome id | chr15 |
Chromosome position | 57921216 |
Reported gene | ALDH1A2 |
Mapped gene | LOC105370834 - ALDH1A2 |
Upstream gene id | 105370834 |
Downstream gene id | 8854 |
SNP gene ids | |
Upstream gene distance | 145892 |
Downstream gene distance | 32208 |
SNP risk allele | rs1550576-? |
SNPs | rs1550576 |
Merged | 0 |
SNP id current | 1550576 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.86 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 1.92 |
%95 Ci | [NR] |
Platform | Affymetrix [808465] |
CNV | N |
Mapped trait | hypertension |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000537 |
Study accession | GCST000447 |