SNP Detail For rs1549309
1.Mapping Information
Human SNP ID rs1549309
Human chromosome chr5
Human SNP position 167799974
Pig chromosome chr16
Pig SNP position 60717047
2.Annotation Information
PubMed ID23636237
JournalAm J Clin Nutr
Linkwww.ncbi.nlm.nih.gov/pubmed/23636237
StudyGenome-wide meta-analysis of observational studies shows common genetic variants associated with macronutrient intake.
Disease/TraitDietary macronutrient intake
Initial sample37,537 European ancestry individuals
Replication sample33,533 European ancestry individuals
Region5q34
Chromosome idchr5
Chromosome position167799974
Reported geneNR
Mapped geneTENM2
Upstream gene id
Downstream gene id
SNP gene ids57451
Upstream gene distance
Downstream gene distance
SNP risk allelers1549309-A
SNPsrs1549309
Merged0
SNP id current1549309
Contextintron_variant
Intergenic0
Allele frequency0.17
P value0.000002
Pvalue mlog5.69897000433601
P value text(Carbohydrate)
Or beta0.27
%95 Ci[0.15-0.39] % increase
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traitenergy intake
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003939
Study accessionGCST001988