Human SNP ID | rs1546676 |
---|---|
Human chromosome | chr2 |
Human SNP position | 153652726 |
Pig chromosome | chr15 |
Pig SNP position | 68392230 |
PubMed ID | 25524916 |
---|---|
Journal | Diabetes |
Link | www.ncbi.nlm.nih.gov/pubmed/25524916 |
Study | Genetic Variants Associated with Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium. |
Disease/Trait | Glucose homeostasis traits |
Initial sample | up to 4,176 Mexican American individuals |
Replication sample | NA |
Region | 2q23.3 |
Chromosome id | chr2 |
Chromosome position | 153652726 |
Reported gene | intergenic |
Mapped gene | RPRM - DNAJA1P2 |
Upstream gene id | 56475 |
Downstream gene id | 100131207 |
SNP gene ids | |
Upstream gene distance | 173918 |
Downstream gene distance | 108562 |
SNP risk allele | rs1546676-? |
SNPs | rs1546676 |
Merged | 0 |
SNP id current | 1546676 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (M) |
Or beta | 23.62 |
%95 Ci | [12.86-34.38] unit increase |
Platform | Illumina [693128] |
CNV | N |
Mapped trait | insulin sensitivity measurement, glucose homeostasis measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004471, http://www.ebi.ac.uk/efo/EFO_0006896 |
Study accession | GCST002726 |