Human SNP ID | rs1544167 |
---|---|
Human chromosome | chr6 |
Human SNP position | 159379992 |
Pig chromosome | chr1 |
Pig SNP position | 9771941 |
PubMed ID | 25575512 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25575512 |
Study | Evidence for several independent genetic variants affecting lipoprotein (a) cholesterol levels. |
Disease/Trait | Lipoprotein (a) - cholesterol levels |
Initial sample | 1,376 Old Order Amish individuals |
Replication sample | NA |
Region | 6q25.3 |
Chromosome id | chr6 |
Chromosome position | 159379992 |
Reported gene | intergenic |
Mapped gene | LOC105378084 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105378084 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1544167-? |
SNPs | rs1544167 |
Merged | 0 |
SNP id current | 1544167 |
Context | upstream_gene_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000000004 |
Pvalue mlog | 9.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [~ 2500000] (imputed) |
CNV | N |
Mapped trait | lipoprotein A measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006925 |
Study accession | GCST002746 |